This paper examines the effects of high throughput rates in a spectroscopic bottle sorting system, on the purity of PET and HDPE end-products as well as other key factors such as an increase in material loss, decrease in % material yield and the need for extra manual sorting staff at higher throughput rates. Increasing the throughput rate of a wide belt bottle sorting system from 1,000 kg/hr to 2,000 kg/hr decreased the purity of HDPE by 17% and that of PET by 2%. Material loss had more then doubled for PET from 12% to 32% and for HDPE increased from 8% to 9%. The end-product yields for HDPE and PET had decreased by 3% and 8% respectively. One of the key improvements to the sorting operation was the development of an automated sensor cleaning system, which uses an automated film rotating mechanism.